CRISPRone

CRISPRone report for GCA_002304265.1_ASM230426v1

♦ Seq 1: MPGD01000025.1 Clostridioides difficile strain 7486-A/ST43 7486_contig000025, whole genome shotgun sequence

⇒Summary: seq-len = 44595 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2924-3680 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MPGD01000005.1 Clostridioides difficile strain 7486-A/ST43 7486_contig000005, whole genome shotgun sequence

⇒Summary: seq-len = 248412 bp; # of CRISPR array = 4; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 219-1106 bp]: array | spacers
           [Locus range 138528-138951 bp]: array | spacers
           [Locus range 139555-139981 bp]: array | spacers
           [Locus range 230635-231128 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MPGD01000002.1 Clostridioides difficile strain 7486-A/ST43 7486_contig000002, whole genome shotgun sequence

⇒Summary: seq-len = 300268 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 173148-174888 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MPGD01000023.1 Clostridioides difficile strain 7486-A/ST43 7486_contig000023, whole genome shotgun sequence

⇒Summary: seq-len = 50939 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3973-4995 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MPGD01000006.1 Clostridioides difficile strain 7486-A/ST43 7486_contig000006, whole genome shotgun sequence

⇒Summary: seq-len = 217490 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 125024-126238 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MPGD01000007.1 Clostridioides difficile strain 7486-A/ST43 7486_contig000007, whole genome shotgun sequence

⇒Summary: seq-len = 206701 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 133045-133207 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MPGD01000011.1 Clostridioides difficile strain 7486-A/ST43 7486_contig000011, whole genome shotgun sequence

⇒Summary: seq-len = 169461 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)