CRISPRone

CRISPRone report for GCA_002312055.1_ASM231205v1

♦ Seq 1: MWXG01000027.1 Pseudomonas aeruginosa strain 173 scaffold_26, whole genome shotgun sequence

⇒Summary: seq-len = 71146 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 21545-32450 bp Zoom in on locus 1 x17 x17 CRISPR array Location: 21545-22534 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 21545-22534 bp Num of repeats: 17 Spacers: s1-s16 Gene: cd09718:cas1 Type: universal Location: 22791-23762 bp Gene: COG1203:cas3 Type: Type-I Location: 23759-26989 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 27400-28701 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 28688-29671 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 29682-30710 bp Gene: cd09739:cas6f Type: other Location: 30714-31277 bp CRISPR array Location: 31462-32450 bp Num of repeats: 17 Spacers: s17-s32 CRISPR array Location: 31462-32450 bp Num of repeats: 17 Spacers: s17-s32 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 21545-22534 bp]: array | spacers
           [Locus range 31462-32450 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MWXG01000006.1 Pseudomonas aeruginosa strain 173 scaffold_5, whole genome shotgun sequence

⇒Summary: seq-len = 295429 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 151848-152596 bp Zoom in on locus 1 x13 CRISPR array Location: 151848-152596 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 151848-152596 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 151848-152596 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MWXG01000021.1 Pseudomonas aeruginosa strain 173 scaffold_20, whole genome shotgun sequence

⇒Summary: seq-len = 126392 bp; # of CRISPR array = 0; # of cas gene = 4  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 19704-27965 bp Zoom in on locus 1 Gene: COG1199:DinG Type: Subtype-IV-A Location: 19704-22070 bp Gene: unk Type: unknown Location: 22463-23110 bp Gene: unk Type: unknown Location: 23176-23463 bp Gene: COG2378:WYL Type: other Location: 23594-24436 bp Gene: pfam13280:WYL Type: other Location: 25178-26194 bp Gene: mkCas0115:csx3 Type: other Location: 26340-27965 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)