CRISPRone

CRISPRone report for GCA_002312235.1_ASM231223v1

♦ Seq 1: MWXW01000019.1 Pseudomonas aeruginosa strain 578-B scaffold_18, whole genome shotgun sequence

⇒Summary: seq-len = 49431 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 412-11200 bp Zoom in on locus 1 x15 x17 CRISPR array Location: 412-1280 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 412-1280 bp Num of repeats: 15 Spacers: s1-s14 Gene: cd09718:cas1 Type: universal Location: 1540-2514 bp Gene: COG1203:cas3 Type: Type-I Location: 2511-5741 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6152-7453 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7440-8423 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8434-9462 bp Gene: cd09739:cas6f Type: other Location: 9466-10029 bp CRISPR array Location: 10213-11200 bp Num of repeats: 17 Spacers: s15-s30 CRISPR array Location: 10213-11200 bp Num of repeats: 17 Spacers: s15-s30 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 412-1280 bp]: array | spacers
           [Locus range 10213-11200 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MWXW01000011.1 Pseudomonas aeruginosa strain 578-B scaffold_10, whole genome shotgun sequence

⇒Summary: seq-len = 241279 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 239931-241037 bp Zoom in on locus 1 x19 CRISPR array Location: 239931-241037 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 239931-241037 bp Num of repeats: 19 Spacers: s1-s18 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 239931-241037 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)