CRISPRone

CRISPRone report for GCA_002312465.1_ASM231246v1

♦ Seq 1: MWYL01000004.1 Pseudomonas aeruginosa strain 585 scaffold_3, whole genome shotgun sequence

⇒Summary: seq-len = 434512 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 413219-414325 bp Zoom in on locus 1 x19 CRISPR array Location: 413219-414325 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 413219-414325 bp Num of repeats: 19 Spacers: s1-s18 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 413219-414325 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MWYL01000020.1 Pseudomonas aeruginosa strain 585 scaffold_19, whole genome shotgun sequence

⇒Summary: seq-len = 49539 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 392-11180 bp Zoom in on locus 1 x15 x17 CRISPR array Location: 392-1260 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 392-1260 bp Num of repeats: 15 Spacers: s1-s14 Gene: cd09718:cas1 Type: universal Location: 1520-2494 bp Gene: COG1203:cas3 Type: Type-I Location: 2491-5721 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6132-7433 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7420-8403 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8414-9442 bp Gene: cd09739:cas6f Type: other Location: 9446-10009 bp CRISPR array Location: 10193-11180 bp Num of repeats: 17 Spacers: s15-s30 CRISPR array Location: 10193-11180 bp Num of repeats: 17 Spacers: s15-s30 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 392-1260 bp]: array | spacers
           [Locus range 10193-11180 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)