CRISPRone

CRISPRone report for GCA_002312675.1_ASM231267v1

♦ Seq 1: MWYE01000035.1 Pseudomonas aeruginosa strain PPF-18 scaffold_34, whole genome shotgun sequence

⇒Summary: seq-len = 10828 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 774-10122 bp Zoom in on locus 1 x24 Gene: cd09641:cas3HD Type: Type-I Location: 774-3008 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 3058-3732 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 3729-5522 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 5519-6388 bp Gene: pfam01930:cas4 Type: Type-I Location: 6407-7039 bp Gene: cd09721:cas1 Type: universal Location: 7043-8083 bp Gene: cd09725:cas2 Type: universal Location: 8093-8383 bp CRISPR array Location: 8563-10122 bp Num of repeats: 24 Spacers: s1-s23 CRISPR array Location: 8563-10122 bp Num of repeats: 24 Spacers: s1-s23 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8563-10122 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)