CRISPRone

CRISPRone report for GCA_002312695.1_ASM231269v1

♦ Seq 1: MWYM01000015.1 Pseudomonas aeruginosa strain 403 scaffold_14, whole genome shotgun sequence

⇒Summary: seq-len = 48297 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38581-47999 bp Zoom in on locus 1 x13 x2 CRISPR array Location: 38581-39329 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 38581-39329 bp Num of repeats: 13 Spacers: s1-s12 Gene: cd09739:cas6f Type: other Location: 39512-40075 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 40079-41107 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 41118-42101 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 42088-43392 bp Gene: COG1203:cas3 Type: Type-I Location: 43450-46680 bp Gene: cd09718:cas1 Type: universal Location: 46677-47651 bp CRISPR array Location: 47912-47999 bp Num of repeats: 2 Spacers: s13-s13 CRISPR array Location: 47912-47999 bp Num of repeats: 2 Spacers: s13-s13 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38581-39329 bp]: array | spacers
           [Locus range 47912-47999 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)