CRISPRone

CRISPRone report for GCA_002312755.1_ASM231275v1

♦ Seq 1: MWYQ01000026.1 Pseudomonas aeruginosa strain 297 scaffold_25, whole genome shotgun sequence

⇒Summary: seq-len = 57509 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 37738-49074 bp Zoom in on locus 1 x54 CRISPR array Location: 37738-41282 bp Num of repeats: 54 Spacers: s1-s53 CRISPR array Location: 37738-41282 bp Num of repeats: 54 Spacers: s1-s53 Gene: cd09725:cas2 Type: universal Location: 41464-41754 bp Gene: cd09721:cas1 Type: universal Location: 41764-42804 bp Gene: pfam01930:cas4 Type: Type-I Location: 42808-43440 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 43459-44328 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 44325-46118 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 46115-46789 bp Gene: cd09641:cas3HD Type: Type-I Location: 46840-49074 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 37738-41282 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MWYQ01000006.1 Pseudomonas aeruginosa strain 297 scaffold_5, whole genome shotgun sequence

⇒Summary: seq-len = 395412 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 94437-94885 bp Zoom in on locus 1 x8 CRISPR array Location: 94437-94885 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 94437-94885 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 94437-94885 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)