CRISPRone

CRISPRone report for GCA_002325945.1_ASM232594v1

♦ Seq 1: NQYZ01000039.1 Pseudomonas aeruginosa strain W1j NODE_39_length_65798_cov_5.9764, whole genome shotgun sequence

⇒Summary: seq-len = 65798 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 7576-18020 bp Zoom in on locus 1 x19 x12 CRISPR array Location: 7576-8684 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 7576-8684 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 8944-9918 bp Gene: COG1203:cas3 Type: Type-I Location: 9915-13145 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 13203-14507 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 14494-15477 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 15488-16516 bp Gene: cd09739:cas6f Type: other Location: 16520-17083 bp CRISPR array Location: 17333-18020 bp Num of repeats: 12 Spacers: s19-s29 CRISPR array Location: 17333-18020 bp Num of repeats: 12 Spacers: s19-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 7576-8684 bp]: array | spacers
           [Locus range 17333-18020 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)