CRISPRone

CRISPRone report for GCA_002325955.1_ASM232595v1

♦ Seq 1: NQZA01000037.1 Pseudomonas aeruginosa strain W1g NODE_37_length_63582_cov_8.20459, whole genome shotgun sequence

⇒Summary: seq-len = 63582 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 389-1261 bp Zoom in on locus 1 x15 CRISPR array Location: 389-1261 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 389-1261 bp Num of repeats: 15 Spacers: s1-s14 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 389-1261 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NQZA01000033.1 Pseudomonas aeruginosa strain W1g NODE_33_length_68772_cov_11.7931, whole genome shotgun sequence

⇒Summary: seq-len = 68772 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 26401-34803 bp Zoom in on locus 1 x10 Gene: cd09641:cas3HD Type: Type-I Location: 26401-28635 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 28686-29360 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 29357-31120 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 31132-32001 bp Gene: pfam01930:cas4 Type: Type-I Location: 32020-32652 bp Gene: cd09721:cas1 Type: universal Location: 32772-33695 bp Gene: cd09725:cas2 Type: universal Location: 33705-33995 bp CRISPR array Location: 34177-34803 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 34177-34803 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 34177-34803 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)