CRISPRone

CRISPRone report for GCA_002326045.1_ASM232604v1

♦ Seq 1: NQZF01000031.1 Pseudomonas aeruginosa strain U1o-2 NODE_31_length_76510_cov_33.6148, whole genome shotgun sequence

⇒Summary: seq-len = 76510 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 29461-39905 bp Zoom in on locus 1 x19 x12 CRISPR array Location: 29461-30569 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 29461-30569 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 30829-31803 bp Gene: COG1203:cas3 Type: Type-I Location: 31800-35030 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 35088-36392 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 36379-37362 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 37373-38401 bp Gene: cd09739:cas6f Type: other Location: 38405-38968 bp CRISPR array Location: 39218-39905 bp Num of repeats: 12 Spacers: s19-s29 CRISPR array Location: 39218-39905 bp Num of repeats: 12 Spacers: s19-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 29461-30569 bp]: array | spacers
           [Locus range 39218-39905 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)