CRISPRone

CRISPRone report for GCA_002326355.1_ASM232635v1

♦ Seq 1: NQZX01000066.1 Pseudomonas aeruginosa strain env345 NODE_66_length_7076_cov_8.08159, whole genome shotgun sequence

⇒Summary: seq-len = 7076 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 5254-6723 bp Zoom in on locus 1 x25 CRISPR array Location: 5254-6723 bp Num of repeats: 25 Spacers: s1-s24 CRISPR array Location: 5254-6723 bp Num of repeats: 25 Spacers: s1-s24 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 5254-6723 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NQZX01000005.1 Pseudomonas aeruginosa strain env345 NODE_5_length_295592_cov_8.92364, whole genome shotgun sequence

⇒Summary: seq-len = 295592 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 106555-117140 bp Zoom in on locus 1 Gene: COG0640:csa3 Type: Subtype-I-A Location: 106555-107424 bp Gene: pfam00078:RT Type: other Location: 112333-113601 bp Gene: unk Type: unknown Location: 113751-114149 bp Gene: unk Type: unknown Location: 114333-114512 bp Gene: cls000170:cas4 Type: Type-I Location: 115596-117140 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)