CRISPRone

CRISPRone report for GCA_002326435.1_ASM232643v1

♦ Seq 1: NRAF01000005.1 Pseudomonas aeruginosa strain env172 NODE_5_length_208680_cov_15.3778, whole genome shotgun sequence

⇒Summary: seq-len = 208680 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 451-1200 bp Zoom in on locus 1 x13 CRISPR array Location: 451-1200 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 451-1200 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 451-1200 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NRAF01000016.1 Pseudomonas aeruginosa strain env172 NODE_16_length_130539_cov_38.7057, whole genome shotgun sequence

⇒Summary: seq-len = 130539 bp; # of CRISPR array = 0; # of cas gene = 5  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 29849-35321 bp Zoom in on locus 1 Gene: cd09708:DinG Type: Subtype-IV-A Location: 29849-32023 bp Gene: mkCas0159:csf5gr6 Type: Subtype-IV-A Location: 32112-32837 bp Gene: cd09705:csf1gr8 Type: Subtype-IV-A Location: 32866-33621 bp Gene: cd09706:csf2gr7 Type: Subtype-IV-A Location: 33621-34664 bp Gene: cd09707:csf3gr5 Type: Subtype-IV-A Location: 34671-35321 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NRAF01000027.1 Pseudomonas aeruginosa strain env172 NODE_27_length_98492_cov_17.4447, whole genome shotgun sequence

⇒Summary: seq-len = 98492 bp; # of CRISPR array = 0; # of cas gene = 1  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 57181-57744 bp Zoom in on locus 1 Gene: cd09693:cas5 Type: Type-I Location: 57181-57744 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)