CRISPRone

CRISPRone report for GCA_002326515.1_ASM232651v1

♦ Seq 1: NQZK01000005.1 Pseudomonas aeruginosa strain S21a NODE_5_length_220761_cov_5.86268, whole genome shotgun sequence

⇒Summary: seq-len = 220761 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 102581-112938 bp Zoom in on locus 1 x12 x17 CRISPR array Location: 102581-103281 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 102581-103281 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09641:cas3HD Type: Type-I Location: 104053-106734 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 106737-108305 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 108302-108832 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 108842-109984 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 109986-110648 bp Gene: pfam08798:cas6e Type: other Location: 110623-111234 bp Gene: cd09719:cas1 Type: universal Location: 111261-111572 bp Gene: pfam09707:cas2 Type: universal Location: 111569-111868 bp CRISPR array Location: 111933-112938 bp Num of repeats: 17 Spacers: s12-s27 CRISPR array Location: 111933-112938 bp Num of repeats: 17 Spacers: s12-s27 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 102581-103281 bp]: array | spacers
           [Locus range 111933-112938 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NQZK01000029.1 Pseudomonas aeruginosa strain S21a NODE_29_length_68757_cov_5.80699, whole genome shotgun sequence

⇒Summary: seq-len = 68757 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 20833-31212 bp Zoom in on locus 1 x12 x19 CRISPR array Location: 20833-21522 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 20833-21522 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09718:cas1 Type: universal Location: 21782-22756 bp Gene: COG1203:cas3 Type: Type-I Location: 22753-25983 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 26041-27345 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 27332-28315 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 28326-29354 bp Gene: cd09739:cas6f Type: other Location: 29358-29921 bp CRISPR array Location: 30105-31212 bp Num of repeats: 19 Spacers: s12-s29 CRISPR array Location: 30105-31212 bp Num of repeats: 19 Spacers: s12-s29 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 20833-21522 bp]: array | spacers
           [Locus range 30105-31212 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)