CRISPRone

CRISPRone report for GCA_002326585.1_ASM232658v1

♦ Seq 1: NQZV01000038.1 Pseudomonas aeruginosa strain env406b NODE_38_length_67701_cov_10.9772, whole genome shotgun sequence

⇒Summary: seq-len = 67701 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36552-47771 bp Zoom in on locus 1 x19 x26 CRISPR array Location: 36552-37660 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 36552-37660 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09739:cas6f Type: other Location: 37843-38406 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 38410-39438 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39449-40432 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 40419-41723 bp Gene: COG1203:cas3 Type: Type-I Location: 41781-45011 bp Gene: cd09718:cas1 Type: universal Location: 45008-45982 bp CRISPR array Location: 46244-47771 bp Num of repeats: 26 Spacers: s19-s43 CRISPR array Location: 46244-47771 bp Num of repeats: 26 Spacers: s19-s43 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36552-37660 bp]: array | spacers
           [Locus range 46244-47771 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)