CRISPRone

CRISPRone report for GCA_002326605.1_ASM232660v1

♦ Seq 1: NQZZ01000011.1 Pseudomonas aeruginosa strain env241a NODE_11_length_177375_cov_10.7712, whole genome shotgun sequence

⇒Summary: seq-len = 177375 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 128899-139819 bp Zoom in on locus 1 x20 x20 CRISPR array Location: 128899-130069 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 128899-130069 bp Num of repeats: 20 Spacers: s1-s19 Gene: cd09718:cas1 Type: universal Location: 130329-131303 bp Gene: COG1203:cas3 Type: Type-I Location: 131300-134530 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 134588-135892 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 135879-136862 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 136873-137901 bp Gene: cd09739:cas6f Type: other Location: 137905-138468 bp CRISPR array Location: 138652-139819 bp Num of repeats: 20 Spacers: s20-s38 CRISPR array Location: 138652-139819 bp Num of repeats: 20 Spacers: s20-s38 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 128899-130069 bp]: array | spacers
           [Locus range 138652-139819 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NQZZ01000003.1 Pseudomonas aeruginosa strain env241a NODE_3_length_320976_cov_11.4802, whole genome shotgun sequence

⇒Summary: seq-len = 320976 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 288301-298658 bp Zoom in on locus 1 x12 x17 CRISPR array Location: 288301-289001 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 288301-289001 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09641:cas3HD Type: Type-I Location: 289773-292454 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 292457-294025 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 294022-294552 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 294562-295704 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 295706-296368 bp Gene: pfam08798:cas6e Type: other Location: 296343-296954 bp Gene: cd09719:cas1 Type: universal Location: 296981-297292 bp Gene: pfam09707:cas2 Type: universal Location: 297289-297588 bp CRISPR array Location: 297653-298658 bp Num of repeats: 17 Spacers: s12-s27 CRISPR array Location: 297653-298658 bp Num of repeats: 17 Spacers: s12-s27 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 288301-289001 bp]: array | spacers
           [Locus range 297653-298658 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)