CRISPRone

CRISPRone report for GCA_002326745.1_ASM232674v1

♦ Seq 1: NRAM01000002.1 Pseudomonas aeruginosa strain env144b NODE_2_length_357314_cov_5.70147, whole genome shotgun sequence

⇒Summary: seq-len = 357314 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1031-9404 bp Zoom in on locus 1 x15 Gene: COG1203:cas3 Type: Type-I Location: 1031-2905 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 2956-3630 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 3627-5390 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 5402-6271 bp Gene: pfam01930:cas4 Type: Type-I Location: 6290-6922 bp Gene: cd09721:cas1 Type: universal Location: 7042-7965 bp Gene: cd09725:cas2 Type: universal Location: 7975-8265 bp CRISPR array Location: 8447-9404 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 8447-9404 bp Num of repeats: 15 Spacers: s1-s14 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8447-9404 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NRAM01000034.1 Pseudomonas aeruginosa strain env144b NODE_34_length_63276_cov_5.06086, whole genome shotgun sequence

⇒Summary: seq-len = 63276 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 207-955 bp Zoom in on locus 1 x13 CRISPR array Location: 207-955 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 207-955 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 207-955 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NRAM01000048.1 Pseudomonas aeruginosa strain env144b NODE_48_length_45099_cov_5.03009, whole genome shotgun sequence

⇒Summary: seq-len = 45099 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 35777-44967 bp Zoom in on locus 1 x15 CRISPR array Location: 35777-36645 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 35777-36645 bp Num of repeats: 15 Spacers: s1-s14 Gene: cd09739:cas6f Type: other Location: 36828-37391 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 37395-38423 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 38434-39417 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 39404-40708 bp Gene: COG1203:cas3 Type: Type-I Location: 40766-43996 bp Gene: cd09718:cas1 Type: universal Location: 43993-44967 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 35777-36645 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: NRAM01000006.1 Pseudomonas aeruginosa strain env144b NODE_6_length_193305_cov_5.47204, whole genome shotgun sequence

⇒Summary: seq-len = 193305 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 192514-193202 bp Zoom in on locus 1 x12 CRISPR array Location: 192514-193202 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 192514-193202 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 192514-193202 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)