CRISPRone

CRISPRone report for GCA_002329775.1_ASM232977v1

♦ Seq 1: NRFA01000001.1 Pseudomonas aeruginosa strain SJU-S79_1 NODE_1_length_623671_cov_63.0578, whole genome shotgun sequence

⇒Summary: seq-len = 623671 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 319466-331500 bp Zoom in on locus 1 x26 x21 CRISPR array Location: 319466-321019 bp Num of repeats: 26 Spacers: s1-s25 CRISPR array Location: 319466-321019 bp Num of repeats: 26 Spacers: s1-s25 Gene: pfam09707:cas2 Type: universal Location: 321084-321383 bp Gene: cd09719:cas1 Type: universal Location: 321380-322270 bp Gene: pfam08798:cas6e Type: other Location: 322297-322836 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 322883-323545 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 323547-324689 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 324699-325229 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 325226-326794 bp Gene: cd09641:cas3HD Type: Type-I Location: 326797-329478 bp CRISPR array Location: 330251-331500 bp Num of repeats: 21 Spacers: s26-s45 CRISPR array Location: 330251-331500 bp Num of repeats: 21 Spacers: s26-s45 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 319466-321019 bp]: array | spacers
           [Locus range 330251-331500 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)