CRISPRone

CRISPRone report for GCA_002330175.1_ASM233017v1

♦ Seq 1: NRFX01000027.1 Pseudomonas aeruginosa strain env204 NODE_27_length_66687_cov_16.266, whole genome shotgun sequence

⇒Summary: seq-len = 66687 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 65656-66343 bp Zoom in on locus 1 x12 CRISPR array Location: 65656-66343 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 65656-66343 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 65656-66343 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NRFX01000032.1 Pseudomonas aeruginosa strain env204 NODE_32_length_45059_cov_22.7045, whole genome shotgun sequence

⇒Summary: seq-len = 45059 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 34791-44321 bp Zoom in on locus 1 x27 CRISPR array Location: 34791-36544 bp Num of repeats: 27 Spacers: s1-s26 CRISPR array Location: 34791-36544 bp Num of repeats: 27 Spacers: s1-s26 Gene: cd09725:cas2 Type: universal Location: 36726-37016 bp Gene: cd09721:cas1 Type: universal Location: 37026-38066 bp Gene: pfam01930:cas4 Type: Type-I Location: 38070-38702 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 38721-39590 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 39602-41365 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 41362-42036 bp Gene: cd09641:cas3HD Type: Type-I Location: 42087-44321 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 34791-36544 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)