CRISPRone

CRISPRone report for GCA_002330205.1_ASM233020v1

♦ Seq 1: NRFY01000056.1 Pseudomonas aeruginosa strain env203 NODE_56_length_1844_cov_25.4467, whole genome shotgun sequence

⇒Summary: seq-len = 1844 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 651-1638 bp Zoom in on locus 1 x17 CRISPR array Location: 651-1638 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 651-1638 bp Num of repeats: 17 Spacers: s1-s16 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 651-1638 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NRFY01000004.1 Pseudomonas aeruginosa strain env203 NODE_4_length_327318_cov_20.9893, whole genome shotgun sequence

⇒Summary: seq-len = 327318 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 119186-120989 bp Zoom in on locus 1 Gene: mkCas0131:cas8b5 Type: Subtype-I-B Location: 119186-120193 bp Gene: cd06127:DEDDh Type: Type-I Location: 120384-120989 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NRFY01000034.1 Pseudomonas aeruginosa strain env203 NODE_34_length_47661_cov_18.4516, whole genome shotgun sequence

⇒Summary: seq-len = 47661 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 207-10046 bp Zoom in on locus 1 x10 x12 CRISPR array Location: 207-775 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 207-775 bp Num of repeats: 10 Spacers: s1-s9 Gene: cd09718:cas1 Type: universal Location: 1039-2013 bp Gene: COG1203:cas3 Type: Type-I Location: 2010-5240 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5298-6602 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6589-7572 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7583-8611 bp Gene: cd09739:cas6f Type: other Location: 8615-9178 bp CRISPR array Location: 9363-10046 bp Num of repeats: 12 Spacers: s10-s20 CRISPR array Location: 9363-10046 bp Num of repeats: 12 Spacers: s10-s20 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 207-775 bp]: array | spacers
           [Locus range 9363-10046 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)