CRISPRone

CRISPRone report for GCA_002330305.1_ASM233030v1

♦ Seq 1: NRAS01000002.1 Pseudomonas aeruginosa strain env113a NODE_2_length_430887_cov_11.7523, whole genome shotgun sequence

⇒Summary: seq-len = 430887 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 288301-298658 bp Zoom in on locus 1 x12 x17 CRISPR array Location: 288301-289001 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 288301-289001 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09641:cas3HD Type: Type-I Location: 289773-292454 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 292457-294025 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 294022-294552 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 294562-295704 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 295706-296368 bp Gene: pfam08798:cas6e Type: other Location: 296343-296954 bp Gene: cd09719:cas1 Type: universal Location: 296981-297292 bp Gene: pfam09707:cas2 Type: universal Location: 297289-297588 bp CRISPR array Location: 297653-298658 bp Num of repeats: 17 Spacers: s12-s27 CRISPR array Location: 297653-298658 bp Num of repeats: 17 Spacers: s12-s27 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 288301-289001 bp]: array | spacers
           [Locus range 297653-298658 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NRAS01000014.1 Pseudomonas aeruginosa strain env113a NODE_14_length_183915_cov_11.7325, whole genome shotgun sequence

⇒Summary: seq-len = 183915 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 37557-48477 bp Zoom in on locus 1 x20 x20 CRISPR array Location: 37557-38725 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 37557-38725 bp Num of repeats: 20 Spacers: s1-s19 Gene: cd09739:cas6f Type: other Location: 38908-39471 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 39475-40503 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40514-41497 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41484-42788 bp Gene: COG1203:cas3 Type: Type-I Location: 42846-46076 bp Gene: cd09718:cas1 Type: universal Location: 46073-47047 bp CRISPR array Location: 47308-48477 bp Num of repeats: 20 Spacers: s20-s38 CRISPR array Location: 47308-48477 bp Num of repeats: 20 Spacers: s20-s38 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 37557-38725 bp]: array | spacers
           [Locus range 47308-48477 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)