CRISPRone

CRISPRone report for GCA_002330505.1_ASM233050v1

♦ Seq 1: NRFQ01000019.1 Pseudomonas aeruginosa strain env408 NODE_19_length_141480_cov_47.4257, whole genome shotgun sequence

⇒Summary: seq-len = 141480 bp; # of CRISPR array = 0; # of cas gene = 5  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 107742-113214 bp Zoom in on locus 1 Gene: cd09707:csf3gr5 Type: Subtype-IV-A Location: 107742-108392 bp Gene: cd09706:csf2gr7 Type: Subtype-IV-A Location: 108399-109442 bp Gene: cd09705:csf1gr8 Type: Subtype-IV-A Location: 109442-110197 bp Gene: mkCas0159:csf5gr6 Type: Subtype-IV-A Location: 110226-110951 bp Gene: cd09708:DinG Type: Subtype-IV-A Location: 111040-113214 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NRFQ01000026.1 Pseudomonas aeruginosa strain env408 NODE_26_length_117550_cov_23.081, whole genome shotgun sequence

⇒Summary: seq-len = 117550 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 70320-80945 bp Zoom in on locus 1 x21 x13 CRISPR array Location: 70320-71549 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 70320-71549 bp Num of repeats: 21 Spacers: s1-s20 Gene: cd09718:cas1 Type: universal Location: 71809-72783 bp Gene: COG1203:cas3 Type: Type-I Location: 72780-76010 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 76068-77372 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 77359-78342 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 78353-79381 bp Gene: cd09739:cas6f Type: other Location: 79385-79948 bp CRISPR array Location: 80198-80945 bp Num of repeats: 13 Spacers: s21-s32 CRISPR array Location: 80198-80945 bp Num of repeats: 13 Spacers: s21-s32 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 70320-71549 bp]: array | spacers
           [Locus range 80198-80945 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)