CRISPRone

CRISPRone report for GCA_002330515.1_ASM233051v1

♦ Seq 1: NRBM01000009.1 Pseudomonas aeruginosa strain env005 NODE_9_length_229251_cov_14.9868, whole genome shotgun sequence

⇒Summary: seq-len = 229251 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36552-48071 bp Zoom in on locus 1 x23 x27 CRISPR array Location: 36552-37900 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 36552-37900 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09739:cas6f Type: other Location: 38083-38646 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 38650-39678 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39689-40672 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 40659-41963 bp Gene: COG1203:cas3 Type: Type-I Location: 42021-45251 bp Gene: cd09718:cas1 Type: universal Location: 45248-46222 bp CRISPR array Location: 46484-48071 bp Num of repeats: 27 Spacers: s23-s48 CRISPR array Location: 46484-48071 bp Num of repeats: 27 Spacers: s23-s48 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36552-37900 bp]: array | spacers
           [Locus range 46484-48071 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)