CRISPRone

CRISPRone report for GCA_002330555.1_ASM233055v1

♦ Seq 1: NRFV01000051.1 Pseudomonas aeruginosa strain env224 NODE_51_length_18619_cov_6.67932, whole genome shotgun sequence

⇒Summary: seq-len = 18619 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 207-955 bp Zoom in on locus 1 x13 CRISPR array Location: 207-955 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 207-955 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 207-955 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NRFV01000035.1 Pseudomonas aeruginosa strain env224 NODE_35_length_46145_cov_7.40902, whole genome shotgun sequence

⇒Summary: seq-len = 46145 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 207-10402 bp Zoom in on locus 1 x12 x16 CRISPR array Location: 207-895 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 207-895 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09718:cas1 Type: universal Location: 1152-2126 bp Gene: COG1203:cas3 Type: Type-I Location: 2123-5353 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5411-6715 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6702-7685 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7696-8724 bp Gene: cd09739:cas6f Type: other Location: 8728-9291 bp CRISPR array Location: 9475-10402 bp Num of repeats: 16 Spacers: s12-s26 CRISPR array Location: 9475-10402 bp Num of repeats: 16 Spacers: s12-s26 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 207-895 bp]: array | spacers
           [Locus range 9475-10402 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)