CRISPRone

CRISPRone report for GCA_002330725.1_ASM233072v1

♦ Seq 1: NRAV01000002.1 Pseudomonas aeruginosa strain env108 NODE_2_length_608754_cov_8.14363, whole genome shotgun sequence

⇒Summary: seq-len = 608754 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 454681-464977 bp Zoom in on locus 1 x12 x16 CRISPR array Location: 454681-455381 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 454681-455381 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09641:cas3HD Type: Type-I Location: 456153-458834 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 458837-460405 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 460402-460932 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 460942-462084 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 462086-462748 bp Gene: pfam08798:cas6e Type: other Location: 462723-463334 bp Gene: cd09719:cas1 Type: universal Location: 463361-463672 bp Gene: pfam09707:cas2 Type: universal Location: 463669-463968 bp CRISPR array Location: 464033-464977 bp Num of repeats: 16 Spacers: s12-s26 CRISPR array Location: 464033-464977 bp Num of repeats: 16 Spacers: s12-s26 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 454681-455381 bp]: array | spacers
           [Locus range 464033-464977 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NRAV01000026.1 Pseudomonas aeruginosa strain env108 NODE_26_length_69833_cov_7.45303, whole genome shotgun sequence

⇒Summary: seq-len = 69833 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 21664-32283 bp Zoom in on locus 1 x16 x19 CRISPR array Location: 21664-22593 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 21664-22593 bp Num of repeats: 16 Spacers: s1-s15 Gene: cd09718:cas1 Type: universal Location: 22853-23827 bp Gene: COG1203:cas3 Type: Type-I Location: 23824-27054 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 27112-28416 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 28403-29386 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 29397-30425 bp Gene: cd09739:cas6f Type: other Location: 30429-30992 bp CRISPR array Location: 31176-32283 bp Num of repeats: 19 Spacers: s16-s33 CRISPR array Location: 31176-32283 bp Num of repeats: 19 Spacers: s16-s33 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 21664-22593 bp]: array | spacers
           [Locus range 31176-32283 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)