CRISPRone

CRISPRone report for GCA_002330805.1_ASM233080v1

♦ Seq 1: NRBB01000032.1 Pseudomonas aeruginosa strain env100 NODE_32_length_69039_cov_8.36203, whole genome shotgun sequence

⇒Summary: seq-len = 69039 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 26575-35241 bp Zoom in on locus 1 x14 Gene: cd09641:cas3HD Type: Type-I Location: 26575-28809 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 28860-29534 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 29531-31294 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 31306-32175 bp Gene: pfam01930:cas4 Type: Type-I Location: 32194-32826 bp Gene: cd09721:cas1 Type: universal Location: 32946-33869 bp Gene: cd09725:cas2 Type: universal Location: 33879-34169 bp CRISPR array Location: 34351-35241 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 34351-35241 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 34351-35241 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)