CRISPRone

CRISPRone report for GCA_002332065.1_ASM233206v1

♦ Seq 1: NRGI01000036.1 Pseudomonas aeruginosa strain env113b NODE_36_length_63339_cov_7.98975, whole genome shotgun sequence

⇒Summary: seq-len = 63339 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 62368-62995 bp Zoom in on locus 1 x11 CRISPR array Location: 62368-62995 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 62368-62995 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 62368-62995 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NRGI01000023.1 Pseudomonas aeruginosa strain env113b NODE_23_length_114673_cov_8.59583, whole genome shotgun sequence

⇒Summary: seq-len = 114673 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 71765-82350 bp Zoom in on locus 1 Gene: COG0640:csa3 Type: Subtype-I-A Location: 71765-72634 bp Gene: pfam00078:RT Type: other Location: 77543-78811 bp Gene: unk Type: unknown Location: 78961-79359 bp Gene: unk Type: unknown Location: 79543-79722 bp Gene: cls000170:cas4 Type: Type-I Location: 80806-82350 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)