CRISPRone

CRISPRone report for GCA_002332125.1_ASM233212v1

♦ Seq 1: NRGL01000024.1 Pseudomonas aeruginosa strain env097 NODE_24_length_97865_cov_5.77406, whole genome shotgun sequence

⇒Summary: seq-len = 97865 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 96175-97044 bp Zoom in on locus 1 x15 CRISPR array Location: 96175-97044 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 96175-97044 bp Num of repeats: 15 Spacers: s1-s14 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 96175-97044 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NRGL01000070.1 Pseudomonas aeruginosa strain env097 NODE_70_length_19106_cov_6.26034, whole genome shotgun sequence

⇒Summary: seq-len = 19106 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 315-10564 bp Zoom in on locus 1 x9 x20 CRISPR array Location: 315-823 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 315-823 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09718:cas1 Type: universal Location: 1074-2048 bp Gene: COG1203:cas3 Type: Type-I Location: 2045-5275 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5333-6637 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6624-7607 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7618-8646 bp Gene: cd09739:cas6f Type: other Location: 8650-9213 bp CRISPR array Location: 9397-10564 bp Num of repeats: 20 Spacers: s9-s27 CRISPR array Location: 9397-10564 bp Num of repeats: 20 Spacers: s9-s27 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 315-823 bp]: array | spacers
           [Locus range 9397-10564 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)