CRISPRone

CRISPRone report for GCA_002352505.1_K40_RF17.1

♦ Seq 1: JCKF01000012.1 Clostridioides difficile strain RF17 PHRT17c1892, whole genome shotgun sequence

⇒Summary: seq-len = 109367 bp; # of CRISPR array = 1; # of cas gene = 8  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 74297-76830 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JCKF01000044.1 Clostridioides difficile strain RF17 PHRT17c3762, whole genome shotgun sequence

⇒Summary: seq-len = 75857 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 73213-74361 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JCKF01000061.1 Clostridioides difficile strain RF17 PHRT17c3780, whole genome shotgun sequence

⇒Summary: seq-len = 147121 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 19348-21470 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JCKF01000049.1 Clostridioides difficile strain RF17 PHRT17c3768, whole genome shotgun sequence

⇒Summary: seq-len = 165543 bp; # of CRISPR array = 0; # of cas gene = 9  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JCKF01000045.1 Clostridioides difficile strain RF17 PHRT17c3763, whole genome shotgun sequence

⇒Summary: seq-len = 330000 bp; # of CRISPR array = 2; # of cas gene = 2  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 34315-35129 bp]: array | spacers
           [Locus range 99987-102785 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)