CRISPRone

CRISPRone report for GCA_002352515.1_K40_RC10.1

♦ Seq 1: JCKG01000100.1 Clostridioides difficile strain RC10 RT10c3048, whole genome shotgun sequence

⇒Summary: seq-len = 338902 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 275238-275595 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JCKG01000178.1 Clostridioides difficile strain RC10 RT10c3122, whole genome shotgun sequence

⇒Summary: seq-len = 115648 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 608-898 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JCKG01000121.1 Clostridioides difficile strain RC10 RT10c3069, whole genome shotgun sequence

⇒Summary: seq-len = 125560 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 63550-64884 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JCKG01000118.1 Clostridioides difficile strain RC10 RT10c3066, whole genome shotgun sequence

⇒Summary: seq-len = 8052 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2861-3413 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JCKG01000091.1 Clostridioides difficile strain RC10 RT10c3039, whole genome shotgun sequence

⇒Summary: seq-len = 6855 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3591-4276 bp]: array | spacers
           [Locus range 5981-6202 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JCKG01000124.1 Clostridioides difficile strain RC10 RT10c3072, whole genome shotgun sequence

⇒Summary: seq-len = 763 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 47-542 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JCKG01000105.1 Clostridioides difficile strain RC10 RT10c3053, whole genome shotgun sequence

⇒Summary: seq-len = 8948 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7896-8719 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JCKG01000172.1 Clostridioides difficile strain RC10 RT10c3117, whole genome shotgun sequence

⇒Summary: seq-len = 30108 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10616-12424 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JCKG01000187.1 Clostridioides difficile strain RC10 RT10c3131, whole genome shotgun sequence

⇒Summary: seq-len = 236083 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: JCKG01000155.1 Clostridioides difficile strain RC10 RT10c3100, whole genome shotgun sequence

⇒Summary: seq-len = 28227 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 12938-13227 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)