CRISPRone

CRISPRone report for GCA_002442855.1_ASM244285v1

♦ Seq 1: CP017306.1 Pseudomonas aeruginosa strain PA_150577 chromosome, complete genome

⇒Summary: seq-len = 6334472 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1497994-1498802 bp 2 Locus 2: 2885122-2895323 bp Zoom in on locus 1 x14 Zoom in on locus 2 x16 x12 CRISPR array Location: 1497994-1498802 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 1497994-1498802 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 2885122-2886050 bp Num of repeats: 16 Spacers: s14-s28 CRISPR array Location: 2885122-2886050 bp Num of repeats: 16 Spacers: s14-s28 Gene: cd09739:cas6f Type: other Location: 2886232-2886795 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2886799-2887827 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2887838-2888821 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2888808-2890112 bp Gene: COG1203:cas3 Type: Type-I Location: 2890170-2893400 bp Gene: cd09718:cas1 Type: universal Location: 2893397-2894371 bp CRISPR array Location: 2894636-2895323 bp Num of repeats: 12 Spacers: s29-s39 CRISPR array Location: 2894636-2895323 bp Num of repeats: 12 Spacers: s29-s39 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1497994-1498802 bp]: array | spacers
           [Locus range 2885122-2886050 bp]: array | spacers
           [Locus range 2894636-2895323 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)