CRISPRone

CRISPRone report for GCA_002753655.1_ASM275365v1

♦ Seq 1: CP024477.1 Pseudomonas aeruginosa strain 12939 chromosome, complete genome

⇒Summary: seq-len = 6621378 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2833129-2842849 bp Zoom in on locus 1 x3 x17 CRISPR array Location: 2833129-2833277 bp Num of repeats: 3 Spacers: s1-s2 CRISPR array Location: 2833129-2833277 bp Num of repeats: 3 Spacers: s1-s2 Gene: cd09739:cas6f Type: other Location: 2833460-2834023 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2834027-2835055 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2835066-2836049 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2836036-2837340 bp Gene: COG1203:cas3 Type: Type-I Location: 2837398-2840628 bp Gene: cd09718:cas1 Type: universal Location: 2840625-2841599 bp CRISPR array Location: 2841860-2842849 bp Num of repeats: 17 Spacers: s3-s18 CRISPR array Location: 2841860-2842849 bp Num of repeats: 17 Spacers: s3-s18 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2833129-2833277 bp]: array | spacers
           [Locus range 2841860-2842849 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)