CRISPRone

CRISPRone report for GCA_002811035.1_Bfra_US326_v1

♦ Seq 1: PDCS01000022.1 Bacteroides fragilis strain US326 contig0022, whole genome shotgun sequence

⇒Summary: seq-len = 75860 bp; # of CRISPR array = 1; # of cas gene = 9  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 43701-55532 bp Zoom in on locus 1 x16 Gene: cash17:cash17 Type: Type- Location: 43701-44360 bp Gene: unk Type: unknown Location: 44357-44836 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 44850-46259 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 46264-48066 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 48059-49198 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 49218-50057 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 50070-50480 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 50483-51427 bp Gene: cd09634:cas1 Type: universal Location: 51447-53717 bp Gene: cd09725:cas2 Type: universal Location: 53711-54001 bp CRISPR array Location: 54449-55532 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 54449-55532 bp Num of repeats: 16 Spacers: s1-s15 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 54449-55532 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: PDCS01000037.1 Bacteroides fragilis strain US326 contig0037, whole genome shotgun sequence

⇒Summary: seq-len = 26093 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 16556-16800 bp Zoom in on locus 1 x4 CRISPR array Location: 16556-16800 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 16556-16800 bp Num of repeats: 4 Spacers: s1-s3 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 16556-16800 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)