CRISPRone

CRISPRone report for GCA_002811065.1_Bfra_12905_v1

♦ Seq 1: PDCW01000003.1 Bacteroides fragilis strain 12905 contig0003, whole genome shotgun sequence

⇒Summary: seq-len = 246603 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 99603-103216 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 99603-100502 bp Gene: unk Type: unknown Location: 100499-101764 bp Gene: unk Type: unknown Location: 101772-102545 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 102548-103216 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: PDCW01000013.1 Bacteroides fragilis strain 12905 contig0013, whole genome shotgun sequence

⇒Summary: seq-len = 145583 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 124066-138648 bp Zoom in on locus 1 x14 CRISPR array Location: 124066-125020 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 124066-125020 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09725:cas2 Type: universal Location: 125468-125758 bp Gene: cd09634:cas1 Type: universal Location: 125752-128022 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 128042-128986 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 128989-129399 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 129412-130251 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 130271-131410 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 131403-133205 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 133210-134619 bp Gene: unk Type: unknown Location: 134633-135112 bp Gene: cash17:cash17 Type: Type- Location: 135109-136536 bp Gene: unk Type: unknown Location: 136581-137360 bp Gene: unk Type: unknown Location: 137336-137962 bp Gene: cls000004:cas6 Type: other Location: 137980-138648 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 124066-125020 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)