CRISPRone

CRISPRone report for GCA_002811085.1_Bfra_078320_1_v1

♦ Seq 1: PDCV01000033.1 Bacteroides fragilis strain 078320-1 contig0033, whole genome shotgun sequence

⇒Summary: seq-len = 20902 bp; # of CRISPR array = 1; # of cas gene = 3  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 11650-19877 bp Zoom in on locus 1 x20 Gene: cd09643:cas9 Type: Subtype-II-C Location: 11650-15960 bp Gene: unk Type: unknown Location: 15976-16500 bp Gene: unk Type: unknown Location: 16567-16875 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 16995-17927 bp Gene: pfam09827:cas2 Type: Subtype-II-C Location: 17931-18263 bp CRISPR array Location: 18372-19877 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 18372-19877 bp Num of repeats: 20 Spacers: s1-s19 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 18372-19877 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: PDCV01000003.1 Bacteroides fragilis strain 078320-1 contig0003, whole genome shotgun sequence

⇒Summary: seq-len = 372020 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 133754-137367 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 133754-134422 bp Gene: unk Type: unknown Location: 134425-135198 bp Gene: unk Type: unknown Location: 135206-136471 bp Gene: pfam13280:WYL Type: other Location: 136468-137367 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)