CRISPRone

CRISPRone report for GCA_002861065.1_ASM286106v1

♦ Seq 1: PKIS01000001.1 Pseudomonas aeruginosa strain UMB0740 .16933_8_54.1, whole genome shotgun sequence

⇒Summary: seq-len = 1544208 bp; # of CRISPR array = 3; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 894771-904611 bp Zoom in on locus 1 x5 x2 x3 CRISPR array Location: 894771-895043 bp Num of repeats: 5 Spacers: s1-s4 CRISPR array Location: 894771-895043 bp Num of repeats: 5 Spacers: s1-s4 Gene: pfam09707:cas2 Type: universal Location: 895108-895407 bp Gene: cd09719:cas1 Type: universal Location: 895404-896294 bp Gene: pfam08798:cas6e Type: other Location: 896321-896860 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 896907-897569 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 897571-898713 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 898723-899253 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 899250-900818 bp Gene: cd09641:cas3HD Type: Type-I Location: 900821-903502 bp CRISPR array Location: 904277-904366 bp Num of repeats: 2 Spacers: s5-s5 CRISPR array Location: 904277-904366 bp Num of repeats: 2 Spacers: s5-s5 CRISPR array Location: 904461-904611 bp Num of repeats: 3 Spacers: s6-s7 CRISPR array Location: 904461-904611 bp Num of repeats: 3 Spacers: s6-s7 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 894771-895043 bp]: array | spacers
           [Locus range 904277-904366 bp]: array | spacers
           [Locus range 904461-904611 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)