CRISPRone

CRISPRone report for GCA_002866805.1_ASM286680v1

♦ Seq 1: NIZS01000032.1 Pseudomonas aeruginosa strain PA6 NODE_32_length_82525_cov_33.6788, whole genome shotgun sequence

⇒Summary: seq-len = 82525 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 217-10802 bp Zoom in on locus 1 Gene: cls000170:cas4 Type: Type-I Location: 217-1761 bp Gene: unk Type: unknown Location: 2845-3024 bp Gene: unk Type: unknown Location: 3208-3606 bp Gene: pfam00078:RT Type: other Location: 3756-5024 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 9933-10802 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NIZS01000005.1 Pseudomonas aeruginosa strain PA6 NODE_5_length_255574_cov_26.7845, whole genome shotgun sequence

⇒Summary: seq-len = 255527 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 62392-63019 bp Zoom in on locus 1 x11 CRISPR array Location: 62392-63019 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 62392-63019 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 62392-63019 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)