CRISPRone

CRISPRone report for GCA_002891605.1_ASM289160v1

♦ Seq 1: LJCK01000001.1 Clostridioides difficile strain LIBA5809 .11940_2_74.1, whole genome shotgun sequence

⇒Summary: seq-len = 405862 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LJCK01000025.1 Clostridioides difficile strain LIBA5809 .11940_2_74.25, whole genome shotgun sequence

⇒Summary: seq-len = 71156 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 9487-10444 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LJCK01000004.1 Clostridioides difficile strain LIBA5809 .11940_2_74.4, whole genome shotgun sequence

⇒Summary: seq-len = 139544 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7718-8012 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: LJCK01000016.1 Clostridioides difficile strain LIBA5809 .11940_2_74.16, whole genome shotgun sequence

⇒Summary: seq-len = 92212 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 91815-92025 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: LJCK01000042.1 Clostridioides difficile strain LIBA5809 .11940_2_74.42, whole genome shotgun sequence

⇒Summary: seq-len = 27090 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 24553-26035 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: LJCK01000020.1 Clostridioides difficile strain LIBA5809 .11940_2_74.20, whole genome shotgun sequence

⇒Summary: seq-len = 77360 bp; # of CRISPR array = 0; # of cas gene = 3  (type IV) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: LJCK01000028.1 Clostridioides difficile strain LIBA5809 .11940_2_74.28, whole genome shotgun sequence

⇒Summary: seq-len = 61112 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 57425-57784 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: LJCK01000006.1 Clostridioides difficile strain LIBA5809 .11940_2_74.6, whole genome shotgun sequence

⇒Summary: seq-len = 128618 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 30481-30770 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)