CRISPRone

CRISPRone report for GCA_002939335.1_ASM293933v1

♦ Seq 1: LQZI01000053.1 Clostridioides difficile strain 33251 NODE_5_length_186262_cov_30.3776_ID_9, whole genome shotgun sequence

⇒Summary: seq-len = 186262 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 185181-186133 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LQZI01000048.1 Clostridioides difficile strain 33251 NODE_53_length_14727_cov_28.8541_ID_105, whole genome shotgun sequence

⇒Summary: seq-len = 14727 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1202-1625 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LQZI01000022.1 Clostridioides difficile strain 33251 NODE_2_length_319895_cov_29.4997_ID_3, whole genome shotgun sequence

⇒Summary: seq-len = 319895 bp; # of CRISPR array = 1; # of cas gene = 7  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 5266-5623 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: LQZI01000009.1 Clostridioides difficile strain 33251 NODE_18_length_63848_cov_25.6796_ID_35, whole genome shotgun sequence

⇒Summary: seq-len = 63848 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 60138-60364 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: LQZI01000044.1 Clostridioides difficile strain 33251 NODE_4_length_187925_cov_23.0987_ID_7, whole genome shotgun sequence

⇒Summary: seq-len = 187925 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 63374-63932 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: LQZI01000001.1 Clostridioides difficile strain 33251 NODE_10_length_112950_cov_24.8905_ID_19, whole genome shotgun sequence

⇒Summary: seq-len = 112950 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 111764-112650 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: LQZI01000020.1 Clostridioides difficile strain 33251 NODE_28_length_47681_cov_20.8348_ID_55, whole genome shotgun sequence

⇒Summary: seq-len = 47681 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 403-563 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: LQZI01000011.1 Clostridioides difficile strain 33251 NODE_1_length_384357_cov_32.4627_ID_1, whole genome shotgun sequence

⇒Summary: seq-len = 384357 bp; # of CRISPR array = 1; # of cas gene = 12  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 215938-217409 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: LQZI01000038.1 Clostridioides difficile strain 33251 NODE_44_length_22838_cov_16.5991_ID_87, whole genome shotgun sequence

⇒Summary: seq-len = 22838 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10185-10942 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: LQZI01000016.1 Clostridioides difficile strain 33251 NODE_24_length_51961_cov_23.9377_ID_47, whole genome shotgun sequence

⇒Summary: seq-len = 51961 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 12599-12692 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)