CRISPRone

CRISPRone report for GCA_002939365.1_ASM293936v1

♦ Seq 1: LQZJ01000052.1 Clostridioides difficile strain 33736 NODE_31_length_29254_cov_42.0895_ID_61, whole genome shotgun sequence

⇒Summary: seq-len = 29254 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10188-11538 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LQZJ01000061.1 Clostridioides difficile strain 33736 NODE_3_length_272761_cov_52.9906_ID_5, whole genome shotgun sequence

⇒Summary: seq-len = 272761 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 185231-186645 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LQZJ01000067.1 Clostridioides difficile strain 33736 NODE_45_length_8378_cov_32.8187_ID_89, whole genome shotgun sequence

⇒Summary: seq-len = 8378 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4651-5530 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: LQZJ01000094.1 Clostridioides difficile strain 33736 NODE_6_length_177137_cov_44.5343_ID_11, whole genome shotgun sequence

⇒Summary: seq-len = 177137 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 171931-173671 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: LQZJ01000050.1 Clostridioides difficile strain 33736 NODE_2_length_424707_cov_56.9301_ID_3, whole genome shotgun sequence

⇒Summary: seq-len = 424707 bp; # of CRISPR array = 2; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 166969-168702 bp]: array | spacers
           [Locus range 404738-404831 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: LQZJ01000038.1 Clostridioides difficile strain 33736 NODE_19_length_69977_cov_38.4372_ID_37, whole genome shotgun sequence

⇒Summary: seq-len = 69977 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 69415-69576 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: LQZJ01000083.1 Clostridioides difficile strain 33736 NODE_5_length_188265_cov_47.4462_ID_9, whole genome shotgun sequence

⇒Summary: seq-len = 188265 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 63425-64248 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: LQZJ01000039.1 Clostridioides difficile strain 33736 NODE_1_length_561772_cov_54.0424_ID_1, whole genome shotgun sequence

⇒Summary: seq-len = 561772 bp; # of CRISPR array = 1; # of cas gene = 7  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 316612-317235 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)