CRISPRone

CRISPRone report for GCA_002939425.1_ASM293942v1

♦ Seq 1: LQZH01000040.1 Clostridioides difficile strain 32935 NODE_7_length_188269_cov_25.3021_ID_13, whole genome shotgun sequence

⇒Summary: seq-len = 188269 bp; # of CRISPR array = 1; # of cas gene = 3  (type IV) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 63401-64155 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LQZH01000042.1 Clostridioides difficile strain 32935 NODE_9_length_176886_cov_23.3553_ID_17, whole genome shotgun sequence

⇒Summary: seq-len = 176886 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 171876-173421 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LQZH01000005.1 Clostridioides difficile strain 32935 NODE_14_length_97817_cov_26.5064_ID_27, whole genome shotgun sequence

⇒Summary: seq-len = 97817 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 349-1434 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: LQZH01000025.1 Clostridioides difficile strain 32935 NODE_32_length_29309_cov_21.2595_ID_63, whole genome shotgun sequence

⇒Summary: seq-len = 29309 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10186-11465 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: LQZH01000033.1 Clostridioides difficile strain 32935 NODE_3_length_272648_cov_29.6258_ID_5, whole genome shotgun sequence

⇒Summary: seq-len = 272648 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 86125-87469 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: LQZH01000029.1 Clostridioides difficile strain 32935 NODE_36_length_23175_cov_22.7858_ID_71, whole genome shotgun sequence

⇒Summary: seq-len = 23175 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7669-7763 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: LQZH01000011.1 Clostridioides difficile strain 32935 NODE_1_length_384946_cov_33.5536_ID_1, whole genome shotgun sequence

⇒Summary: seq-len = 384946 bp; # of CRISPR array = 1; # of cas gene = 11  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 215988-217984 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: LQZH01000010.1 Clostridioides difficile strain 32935 NODE_19_length_83953_cov_25.8349_ID_37, whole genome shotgun sequence

⇒Summary: seq-len = 83953 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1496-1719 bp]: array | spacers
           [Locus range 3324-3747 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: LQZH01000022.1 Clostridioides difficile strain 32935 NODE_2_length_286089_cov_30.7334_ID_3, whole genome shotgun sequence

⇒Summary: seq-len = 286089 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 241634-242124 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: LQZH01000012.1 Clostridioides difficile strain 32935 NODE_20_length_82570_cov_22.8174_ID_39, whole genome shotgun sequence

⇒Summary: seq-len = 82570 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 403-563 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)