CRISPRone

CRISPRone report for GCA_002940845.1_ASM294084v1

♦ Seq 1: LRDL01000194.1 Clostridioides difficile strain 4380229 contig_49, whole genome shotgun sequence

⇒Summary: seq-len = 27625 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 403-563 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LRDL01000200.1 Clostridioides difficile strain 4380229 contig_54, whole genome shotgun sequence

⇒Summary: seq-len = 23760 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 14998-15092 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LRDL01000184.1 Clostridioides difficile strain 4380229 contig_4, whole genome shotgun sequence

⇒Summary: seq-len = 145694 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 124218-124910 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: LRDL01000100.1 Clostridioides difficile strain 4380229 contig_2, whole genome shotgun sequence

⇒Summary: seq-len = 201326 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 115910-117058 bp]: array | spacers
           [Locus range 118851-119074 bp]: array | spacers
           [Locus range 120679-121102 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: LRDL01000235.1 Clostridioides difficile strain 4380229 contig_86, whole genome shotgun sequence

⇒Summary: seq-len = 7987 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4651-5136 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: LRDL01000192.1 Clostridioides difficile strain 4380229 contig_47, whole genome shotgun sequence

⇒Summary: seq-len = 29077 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10187-11342 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: LRDL01000193.1 Clostridioides difficile strain 4380229 contig_48, whole genome shotgun sequence

⇒Summary: seq-len = 28075 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 19186-20786 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: LRDL01000001.1 Clostridioides difficile strain 4380229 contig_1, whole genome shotgun sequence

⇒Summary: seq-len = 263787 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6307-7521 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: LRDL01000217.1 Clostridioides difficile strain 4380229 contig_7, whole genome shotgun sequence

⇒Summary: seq-len = 119038 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 43857-44479 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: LRDL01000182.1 Clostridioides difficile strain 4380229 contig_38, whole genome shotgun sequence

⇒Summary: seq-len = 36145 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: LRDL01000227.1 Clostridioides difficile strain 4380229 contig_79, whole genome shotgun sequence

⇒Summary: seq-len = 10106 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3427-4774 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)