CRISPRone

CRISPRone report for GCA_002940865.1_ASM294086v1

♦ Seq 1: LRDJ01000041.1 Clostridioides difficile strain 4380226 contig_14, whole genome shotgun sequence

⇒Summary: seq-len = 90132 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2849-3271 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LRDJ01000001.1 Clostridioides difficile strain 4380226 contig_1, whole genome shotgun sequence

⇒Summary: seq-len = 245552 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 244866-245362 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LRDJ01000002.1 Clostridioides difficile strain 4380226 contig_10, whole genome shotgun sequence

⇒Summary: seq-len = 105282 bp; # of CRISPR array = 0; # of cas gene = 7  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: LRDJ01000060.1 Clostridioides difficile strain 4380226 contig_16, whole genome shotgun sequence

⇒Summary: seq-len = 73354 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 53055-54464 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: LRDJ01000166.1 Clostridioides difficile strain 4380226 contig_4, whole genome shotgun sequence

⇒Summary: seq-len = 186451 bp; # of CRISPR array = 1; # of cas gene = 10  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 19217-19767 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: LRDJ01000177.1 Clostridioides difficile strain 4380226 contig_5, whole genome shotgun sequence

⇒Summary: seq-len = 173738 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 113381-114265 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: LRDJ01000178.1 Clostridioides difficile strain 4380226 contig_50, whole genome shotgun sequence

⇒Summary: seq-len = 28357 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10131-10622 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)