CRISPRone

CRISPRone report for GCA_002940905.1_ASM294090v1

♦ Seq 1: LRDI01000001.1 Clostridioides difficile strain 4380187 contig_1, whole genome shotgun sequence

⇒Summary: seq-len = 181731 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 121852-122277 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LRDI01000248.1 Clostridioides difficile strain 4380187 contig_50, whole genome shotgun sequence

⇒Summary: seq-len = 28422 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10130-10684 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LRDI01000004.1 Clostridioides difficile strain 4380187 contig_101, whole genome shotgun sequence

⇒Summary: seq-len = 4890 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4708-4866 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: LRDI01000109.1 Clostridioides difficile strain 4380187 contig_2, whole genome shotgun sequence

⇒Summary: seq-len = 169187 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6291-6978 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: LRDI01000246.1 Clostridioides difficile strain 4380187 contig_49, whole genome shotgun sequence

⇒Summary: seq-len = 29788 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: LRDI01000140.1 Clostridioides difficile strain 4380187 contig_23, whole genome shotgun sequence

⇒Summary: seq-len = 56599 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3465-4483 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: LRDI01000242.1 Clostridioides difficile strain 4380187 contig_45, whole genome shotgun sequence

⇒Summary: seq-len = 32713 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8672-8766 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: LRDI01000024.1 Clostridioides difficile strain 4380187 contig_12, whole genome shotgun sequence

⇒Summary: seq-len = 84814 bp; # of CRISPR array = 1; # of cas gene = 10  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 64333-65610 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: LRDI01000269.1 Clostridioides difficile strain 4380187 contig_7, whole genome shotgun sequence

⇒Summary: seq-len = 110888 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 25382-25543 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: LRDI01000129.1 Clostridioides difficile strain 4380187 contig_22, whole genome shotgun sequence

⇒Summary: seq-len = 58786 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4178-4735 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: LRDI01000283.1 Clostridioides difficile strain 4380187 contig_82, whole genome shotgun sequence

⇒Summary: seq-len = 10730 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3013-3506 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)