CRISPRone

CRISPRone report for GCA_002968695.1_ASM296869v1

♦ Seq 1: CP027174.1 Pseudomonas aeruginosa strain AR_0230 chromosome, complete genome

⇒Summary: seq-len = 7012922 bp; # of CRISPR array = 3; # of cas gene = 10  (type I, IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 103426-104294 bp 2 Locus 2: 1692725-1704303 bp 3 Locus 3: 5207646-5215907 bp Zoom in on locus 1 x15 Zoom in on locus 2 x23 x28 Zoom in on locus 3 CRISPR array Location: 103426-104294 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 103426-104294 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 1692725-1694070 bp Num of repeats: 23 Spacers: s15-s36 CRISPR array Location: 1692725-1694070 bp Num of repeats: 23 Spacers: s15-s36 Gene: cd09739:cas6f Type: other Location: 1694254-1694817 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1694821-1695849 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1695860-1696843 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 1696830-1698134 bp Gene: COG1203:cas3 Type: Type-I Location: 1698192-1701422 bp Gene: cd09718:cas1 Type: universal Location: 1701419-1702393 bp CRISPR array Location: 1702655-1704303 bp Num of repeats: 28 Spacers: s37-s63 CRISPR array Location: 1702655-1704303 bp Num of repeats: 28 Spacers: s37-s63 Gene: COG1199:DinG Type: Subtype-IV-A Location: 5207646-5210012 bp Gene: unk Type: unknown Location: 5210405-5210983 bp Gene: unk Type: unknown Location: 5211127-5211282 bp Gene: COG2378:WYL Type: other Location: 5211536-5212378 bp Gene: pfam13280:WYL Type: other Location: 5213120-5214136 bp Gene: mkCas0115:csx3 Type: other Location: 5214297-5215907 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 103426-104294 bp]: array | spacers
           [Locus range 1692725-1694070 bp]: array | spacers
           [Locus range 1702655-1704303 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)