CRISPRone

CRISPRone report for GCA_002997005.1_ASM299700v1

♦ Seq 1: CP027538.1 Pseudomonas aeruginosa strain AR_0095 chromosome, complete genome

⇒Summary: seq-len = 6822666 bp; # of CRISPR array = 2; # of cas gene = 11  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1942852-1953437 bp 2 Locus 2: 5224055-5236277 bp Zoom in on locus 1 Zoom in on locus 2 x14 x36 Gene: cls000170:cas4 Type: Type-I Location: 1942852-1944396 bp Gene: unk Type: unknown Location: 1945480-1945659 bp Gene: pfam00078:RT Type: other Location: 1946391-1947659 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 1952568-1953437 bp CRISPR array Location: 5224055-5224878 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 5224055-5224878 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09641:cas3HD Type: Type-I Location: 5225652-5228333 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 5228336-5229904 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 5229901-5230431 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 5230441-5231583 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 5231585-5232247 bp Gene: pfam08798:cas6e Type: other Location: 5232222-5232833 bp Gene: cd09719:cas1 Type: universal Location: 5232860-5233750 bp Gene: pfam09707:cas2 Type: universal Location: 5233747-5234046 bp CRISPR array Location: 5234111-5236277 bp Num of repeats: 36 Spacers: s14-s48 CRISPR array Location: 5234111-5236277 bp Num of repeats: 36 Spacers: s14-s48 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 5224055-5224878 bp]: array | spacers
           [Locus range 5234111-5236277 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)