CRISPRone

CRISPRone report for GCA_003044135.1_ASM304413v1

♦ Seq 1: PZOK01000162.1 Clostridioides difficile strain Cd88142 NODE_162_length_7749_cov_50.169969, whole genome shotgun sequence

⇒Summary: seq-len = 7749 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 554-716 bp]: array | spacers
           [Locus range 3463-3558 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: PZOK01000032.1 Clostridioides difficile strain Cd88142 NODE_32_length_31211_cov_33.272853, whole genome shotgun sequence

⇒Summary: seq-len = 31211 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2938-3364 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: PZOK01000197.1 Clostridioides difficile strain Cd88142 NODE_198_length_5358_cov_15.227608, whole genome shotgun sequence

⇒Summary: seq-len = 5358 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3843-4004 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: PZOK01000046.1 Clostridioides difficile strain Cd88142 NODE_46_length_26391_cov_34.772707, whole genome shotgun sequence

⇒Summary: seq-len = 26391 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: PZOK01000013.1 Clostridioides difficile strain Cd88142 NODE_13_length_48730_cov_36.572092, whole genome shotgun sequence

⇒Summary: seq-len = 48730 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 45974-46199 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: PZOK01000037.1 Clostridioides difficile strain Cd88142 NODE_37_length_29104_cov_32.525476, whole genome shotgun sequence

⇒Summary: seq-len = 29104 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5935-6426 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: PZOK01000227.1 Clostridioides difficile strain Cd88142 NODE_228_length_3582_cov_27.601427, whole genome shotgun sequence

⇒Summary: seq-len = 3582 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2449-3468 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: PZOK01000167.1 Clostridioides difficile strain Cd88142 NODE_167_length_7514_cov_28.023397, whole genome shotgun sequence

⇒Summary: seq-len = 7460 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5938-7023 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: PZOK01000139.1 Clostridioides difficile strain Cd88142 NODE_139_length_9212_cov_48.861412, whole genome shotgun sequence

⇒Summary: seq-len = 9212 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2039-2332 bp]: array | spacers
           [Locus range 4160-4716 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: PZOK01000009.1 Clostridioides difficile strain Cd88142 NODE_9_length_50645_cov_41.537534, whole genome shotgun sequence

⇒Summary: seq-len = 50645 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4026-4317 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)