CRISPRone

CRISPRone report for GCA_003055325.1_ASM305532v1

♦ Seq 1: QBEO01000006.1 Pseudomonas aeruginosa strain HIAE_PA08 6c, whole genome shotgun sequence

⇒Summary: seq-len = 432632 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 286844-297360 bp Zoom in on locus 1 x12 x10 CRISPR array Location: 286844-287544 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 286844-287544 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09641:cas3HD Type: Type-I Location: 288320-291001 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 291004-292572 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 292569-293099 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 293109-294251 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 294253-294915 bp Gene: pfam08798:cas6e Type: other Location: 294890-295501 bp Gene: cd09719:cas1 Type: universal Location: 295528-296418 bp Gene: pfam09707:cas2 Type: universal Location: 296415-296714 bp CRISPR array Location: 296779-297360 bp Num of repeats: 10 Spacers: s12-s20 CRISPR array Location: 296779-297360 bp Num of repeats: 10 Spacers: s12-s20 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 286844-287544 bp]: array | spacers
           [Locus range 296779-297360 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QBEO01000007.1 Pseudomonas aeruginosa strain HIAE_PA08 7c, whole genome shotgun sequence

⇒Summary: seq-len = 429787 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 207359-208108 bp Zoom in on locus 1 x13 CRISPR array Location: 207359-208108 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 207359-208108 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 207359-208108 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)