CRISPRone

CRISPRone report for GCA_003071265.1_ASM307126v1

♦ Seq 1: QBET01000005.1 Pseudomonas aeruginosa strain HIAE_PA01 5c, whole genome shotgun sequence

⇒Summary: seq-len = 311349 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 37086-49081 bp Zoom in on locus 1 x21 x31 CRISPR array Location: 37086-38314 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 37086-38314 bp Num of repeats: 21 Spacers: s1-s20 Gene: cd09739:cas6f Type: other Location: 38496-39059 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 39063-40091 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40102-41085 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41072-42373 bp Gene: COG1203:cas3 Type: Type-I Location: 42784-46020 bp Gene: cd09718:cas1 Type: universal Location: 46017-46991 bp CRISPR array Location: 47252-49081 bp Num of repeats: 31 Spacers: s21-s50 CRISPR array Location: 47252-49081 bp Num of repeats: 31 Spacers: s21-s50 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 37086-38314 bp]: array | spacers
           [Locus range 47252-49081 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)