CRISPRone

CRISPRone report for GCA_003073795.1_ASM307379v1

♦ Seq 1: CP029090.1 Pseudomonas aeruginosa strain AR442 chromosome, complete genome

⇒Summary: seq-len = 7267567 bp; # of CRISPR array = 2; # of cas gene = 14  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 158888-169473 bp 2 Locus 2: 3095555-3102343 bp 3 Locus 3: 3849799-3860310 bp Zoom in on locus 1 Zoom in on locus 2 Zoom in on locus 3 x13 x9 Gene: COG0640:csa3 Type: Subtype-I-A Location: 158888-159757 bp Gene: pfam00078:RT Type: other Location: 164666-165934 bp Gene: unk Type: unknown Location: 166084-166482 bp Gene: unk Type: unknown Location: 166666-166845 bp Gene: cls000170:cas4 Type: Type-I Location: 167929-169473 bp Gene: mkCas0115:csx3 Type: other Location: 3095555-3096586 bp Gene: unk Type: unknown Location: 3097031-3097921 bp Gene: pfam13280:WYL Type: other Location: 3098201-3099109 bp Gene: cd09696:cas3 Type: Subtype-I-U Location: 3099122-3102343 bp CRISPR array Location: 3849799-3850560 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 3849799-3850560 bp Num of repeats: 13 Spacers: s1-s12 Gene: pfam09707:cas2 Type: universal Location: 3850625-3850924 bp Gene: cd09719:cas1 Type: universal Location: 3850921-3851811 bp Gene: pfam08798:cas6e Type: other Location: 3851838-3852377 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 3852424-3853086 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 3853088-3854230 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 3854240-3854770 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 3854767-3856335 bp Gene: cd09641:cas3HD Type: Type-I Location: 3856338-3859019 bp CRISPR array Location: 3859793-3860310 bp Num of repeats: 9 Spacers: s13-s20 CRISPR array Location: 3859793-3860310 bp Num of repeats: 9 Spacers: s13-s20 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 3849799-3850560 bp]: array | spacers
           [Locus range 3859793-3860310 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)