CRISPRone

CRISPRone report for GCA_003185875.1_ASM318587v1

♦ Seq 1: QHLE01000005.1 Pseudomonas aeruginosa strain 11987-2-5 NODE_5_length_242666_cov_28.5234, whole genome shotgun sequence

⇒Summary: seq-len = 242666 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 104155-115831 bp Zoom in on locus 1 x13 x28 CRISPR array Location: 104155-104917 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 104155-104917 bp Num of repeats: 13 Spacers: s1-s12 Gene: cd09641:cas3HD Type: Type-I Location: 105693-108374 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 108377-109945 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 109942-110472 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 110482-111624 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 111626-112288 bp Gene: pfam08798:cas6e Type: other Location: 112263-112874 bp Gene: cd09719:cas1 Type: universal Location: 112901-113791 bp Gene: pfam09707:cas2 Type: universal Location: 113788-114087 bp CRISPR array Location: 114152-115831 bp Num of repeats: 28 Spacers: s13-s39 CRISPR array Location: 114152-115831 bp Num of repeats: 28 Spacers: s13-s39 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 104155-104917 bp]: array | spacers
           [Locus range 114152-115831 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)